| Name | What | Region | Country | Lat | Long | Elev Ft. | Pop Est |
| Eametsa | city | Parnumaa | Estonia | 58.4283333 | 24.4597222 | 36 | 1485 |
| Eametsa | city | Parnumaa | Estonia | 58.6208333 | 24.6586111 | 78 | 1523 |
| Eapere | city | Parnumaa | Estonia | 58.5547222 | 24.5794444 | 36 | 1526 |
| Eassalu | city | Parnumaa | Estonia | 58.3944444 | 24.1866667 | 88 | 1531 |
| Easte | city | Saaremaa | Estonia | 58.1088889 | 22.2269444 | 42 | 597 |
| Eavere | city | Parnumaa | Estonia | 58.5547222 | 24.5794444 | 36 | 1526 |
| Ebavere | city | Laane-Virumaa | Estonia | 59.1172222 | 26.2375 | 364 | 1670 |
| Edise | city | Ida-Virumaa | Estonia | 59.3641667 | 27.3677778 | 236 | 4680 |
| Edivere | city | Ida-Virumaa | Estonia | 59.2361111 | 27.5147222 | 180 | 4697 |
| Edru | city | Laane-Virumaa | Estonia | 58.9569444 | 26.2675 | 308 | 1591 |
| Eense | city | Parnumaa | Estonia | 58.6119444 | 24.3844444 | 59 | 1515 |
| Eentsa | city | Parnumaa | Estonia | 58.6119444 | 24.3844444 | 59 | 1515 |
| Eentse | city | Parnumaa | Estonia | 58.6119444 | 24.3844444 | 59 | 1515 |
| Eeriksaare | city | Saaremaa | Estonia | 58.325 | 21.9186111 | 3 | 709 |
| Eerikvere | city | Jogevamaa | Estonia | 58.6766667 | 26.6261111 | 324 | 1265 |
| Eerma | city | Parnumaa | Estonia | 58.6308333 | 24.5238889 | 75 | 1514 |
| Ees-Helmkula | city | Parnumaa | Estonia | 58.4333333 | 23.75 | 39 | 1505 |
| Ees-Helmküla | city | Parnumaa | Estonia | 58.4333333 | 23.75 | 39 | 1505 |
| Ees-Kilgi | city | Parnumaa | Estonia | 58.4025 | 23.8683333 | 39 | 1432 |
| Ees-Pala | city | Jarvamaa | Estonia | 58.85 | 25.4166667 | 226 | 1307 |
| Ees-Soomra | city | Parnumaa | Estonia | 58.3666667 | 24.1666667 | 91 | 1531 |
| Ees-Vaiste | city | Parnumaa | Estonia | 58.35 | 23.8666667 | 26 | 995 |
| Ees-Voobu | city | Jarvamaa | Estonia | 59.0333333 | 25.4666667 | 252 | 1436 |
| Ees-Võõbu | city | Jarvamaa | Estonia | 59.0333333 | 25.4666667 | 252 | 1436 |
| Eeskula | city | Laane-Virumaa | Estonia | 59.3002778 | 26.2958333 | 354 | 1657 |
| Eesküla | city | Laane-Virumaa | Estonia | 59.3002778 | 26.2958333 | 354 | 1657 |
| Eesnurga | city | Viljandimaa | Estonia | 58.5194444 | 25.9430556 | 187 | 1581 |
| Eestnurga | city | Viljandimaa | Estonia | 58.5194444 | 25.9430556 | 187 | 1581 |
| Ehala | city | Parnumaa | Estonia | 58.5333333 | 23.8166667 | 36 | 1428 |
| Ehavere | city | Jogevamaa | Estonia | 58.6430556 | 26.6275 | 259 | 1265 |
| Ehmja | city | Laanemaa | Estonia | 58.8644444 | 23.7688889 | 36 | 1069 |
| Eidapere | city | Raplamaa | Estonia | 58.7513889 | 24.9427778 | 196 | 1085 |
| Eidepere | city | Raplamaa | Estonia | 58.7513889 | 24.9427778 | 196 | 1085 |
| Eigla | city | Laanemaa | Estonia | 58.9166667 | 23.45 | 16 | 294 |
| Eiglakyula | city | Laanemaa | Estonia | 58.9166667 | 23.45 | 16 | 294 |
| Eikla | city | Saaremaa | Estonia | 58.4197222 | 22.5233333 | 65 | 1097 |
| Einbi | city | Laanemaa | Estonia | 58.9911111 | 23.4558333 | 0 | 341 |
| Einby | city | Laanemaa | Estonia | 58.9911111 | 23.4558333 | 0 | 341 |
| Einbyu | city | Laanemaa | Estonia | 58.9911111 | 23.4558333 | 0 | 341 |
| Eipri | city | Laane-Virumaa | Estonia | 59.1308333 | 26.3344444 | 410 | 1667 |
| Eisma | city | Laane-Virumaa | Estonia | 59.5602778 | 26.3047222 | 3 | 932 |
| Eiste | city | Saaremaa | Estonia | 58.3758333 | 22.7208333 | 49 | 1097 |
| Eisterbi | city | Laanemaa | Estonia | 58.9913889 | 23.5225 | 32 | 738 |
| Eisterby | city | Laanemaa | Estonia | 58.9913889 | 23.5225 | 32 | 738 |
| Eisterpa | city | Laanemaa | Estonia | 58.9913889 | 23.5225 | 32 | 738 |
| Eistrepa | city | Laanemaa | Estonia | 58.9913889 | 23.5225 | 32 | 738 |
| Eistvere | city | Jarvamaa | Estonia | 58.6877778 | 25.7361111 | 219 | 1424 |
| Eistvere Asundus | city | Jarvamaa | Estonia | 58.6877778 | 25.7361111 | 219 | 1424 |
| Eivere | city | Jarvamaa | Estonia | 58.9480556 | 25.5438889 | 272 | 1306 |
| Ekhmya | city | Laanemaa | Estonia | 58.8644444 | 23.7688889 | 36 | 1069 |
| Ekhu | city | Parnumaa | Estonia | 58.3897222 | 23.8002778 | 32 | 1385 |
| Ekse | city | Tartumaa | Estonia | 58.5269444 | 26.6441667 | 187 | 3180 |
| El'bikeze | city | Laanemaa | Estonia | 59.1680556 | 23.5338889 | 75 | 512 |
| Elama | city | Harjumaa | Estonia | 59.0488889 | 24.1791667 | 164 | 8358 |
| Elbi | city | Parnumaa | Estonia | 58.5541667 | 24.8075 | 78 | 1526 |
| Elbikese | city | Laanemaa | Estonia | 59.1680556 | 23.5338889 | 75 | 512 |
| Elbiku | city | Laanemaa | Estonia | 59.1680556 | 23.5338889 | 75 | 512 |
| Elbu | city | Parnumaa | Estonia | 58.5133333 | 24.5272222 | 49 | 1526 |
| Elistvere | city | Jogevamaa | Estonia | 58.5722222 | 26.6775 | 219 | 2390 |
| Elistvere Asundus | city | Jogevamaa | Estonia | 58.5722222 | 26.6775 | 219 | 2390 |
| Ellakvere | city | Jogevamaa | Estonia | 58.745 | 26.4244444 | 249 | 1264 |
| Ellama | city | Parnumaa | Estonia | 58.4666667 | 24.2 | 45 | 1527 |
| Ellama | city | Raplamaa | Estonia | 58.7133333 | 24.9463889 | 173 | 1176 |
| Ellamaa | city | Harjumaa | Estonia | 59.0488889 | 24.1791667 | 164 | 8358 |
| Ellamaa | city | Parnumaa | Estonia | 58.4666667 | 24.2 | 45 | 1527 |
| Ellamaa | city | Raplamaa | Estonia | 58.7133333 | 24.9463889 | 173 | 1176 |
| Ellavere | city | Jarvamaa | Estonia | 59.015 | 26.0169444 | 351 | 1409 |
| Elme | city | Saaremaa | Estonia | 58.3666667 | 22.4166667 | 65 | 1097 |
| Elme Asundus | city | Saaremaa | Estonia | 58.3666667 | 22.4166667 | 65 | 1097 |
| Elva | city | Tartumaa | Estonia | 58.2225 | 26.4211111 | 187 | 4094 |
| Elwa | city | Tartumaa | Estonia | 58.2225 | 26.4211111 | 187 | 4094 |
| Elʼbikeze | city | Laanemaa | Estonia | 59.1680556 | 23.5338889 | 75 | 512 |
| Embra | city | Jarvamaa | Estonia | 58.9411111 | 25.8258333 | 298 | 1306 |
| Emmaste | city | Hiiumaa | Estonia | 58.7036111 | 22.6169444 | 16 | 411 |
| Emmu | city | Parnumaa | Estonia | 58.6277778 | 24.0819444 | 65 | 1427 |
| Emmu-Arukula | city | Parnumaa | Estonia | 58.6333333 | 24.1 | 78 | 1445 |
| Emmu-Arukyulya | city | Parnumaa | Estonia | 58.6333333 | 24.1 | 78 | 1445 |
| Emmu-Aruküla | city | Parnumaa | Estonia | 58.6333333 | 24.1 | 78 | 1445 |
| Emmuvere | city | Laanemaa | Estonia | 58.8516667 | 23.5647222 | 22 | 1000 |
| Emumae | city | Laane-Virumaa | Estonia | 58.9275 | 26.3597222 | 387 | 1620 |
| Emumae | city | Laane-Virumaa | Estonia | 58.9402778 | 26.3822222 | 344 | 1658 |
| Emumae Asundus | city | Laane-Virumaa | Estonia | 58.9275 | 26.3597222 | 387 | 1620 |
| Emumagi | city | Laane-Virumaa | Estonia | 58.9402778 | 26.3822222 | 344 | 1658 |
| Emumäe | city | Laane-Virumaa | Estonia | 58.9275 | 26.3597222 | 387 | 1620 |
| Emumäe | city | Laane-Virumaa | Estonia | 58.9402778 | 26.3822222 | 344 | 1658 |
| Emumäe Asundus | city | Laane-Virumaa | Estonia | 58.9275 | 26.3597222 | 387 | 1620 |
| Emumägi | city | Laane-Virumaa | Estonia | 58.9402778 | 26.3822222 | 344 | 1658 |
| Emuvere | city | Laanemaa | Estonia | 58.8516667 | 23.5647222 | 22 | 1000 |
| Endla | city | Saaremaa | Estonia | 58.3661111 | 22.4308333 | 65 | 1097 |
| Endla | city | Jogevamaa | Estonia | 58.8166667 | 26.2363889 | 269 | 1260 |
| Eng-bu | city | Laanemaa | Estonia | 58.9911111 | 23.4558333 | 0 | 341 |
| Enge | city | Parnumaa | Estonia | 58.6397222 | 24.5522222 | 75 | 1519 |
| Enge | city | Viljandimaa | Estonia | 58.5277778 | 25.4341667 | 259 | 1601 |
| Englema | city | Harjumaa | Estonia | 59.2313889 | 23.8697222 | 36 | 8939 |
| Engo | city | Hiiumaa | Estonia | 58.8505556 | 22.4663889 | 49 | 755 |
| Eniste | city | Jarvamaa | Estonia | 58.7333333 | 25.4 | 213 | 1316 |
| Enkkyula | city | Jogevamaa | Estonia | 58.7 | 26.5380556 | 318 | 1265 |
| Enniksaare | city | Ida-Virumaa | Estonia | 59.0172222 | 26.9375 | 167 | 4725 |
| Enniksare | city | Ida-Virumaa | Estonia | 59.0172222 | 26.9375 | 167 | 4725 |
| Ennikse | city | Parnumaa | Estonia | 58.4827778 | 23.8175 | 75 | 1526 |
| Enniste | city | Jarvamaa | Estonia | 58.7333333 | 25.4 | 213 | 1316 |
| Ennu | city | Tartumaa | Estonia | 58.2075 | 26.4966667 | 377 | 3618 |
| Ense | city | Laanemaa | Estonia | 58.8358333 | 23.9811111 | 45 | 1069 |
| Entsa | city | Parnumaa | Estonia | 58.6119444 | 24.3844444 | 59 | 1515 |
| Entse | city | Laanemaa | Estonia | 58.8358333 | 23.9811111 | 45 | 1069 |
| Enze | city | Laanemaa | Estonia | 58.8358333 | 23.9811111 | 45 | 1069 |
| Eoste | city | Polvamaa | Estonia | 58.1036111 | 27.0986111 | 183 | 1316 |
| Epa | city | Parnumaa | Estonia | 58.5666667 | 24.2333333 | 78 | 1526 |
| Epra | city | Viljandimaa | Estonia | 58.5102778 | 25.4427778 | 275 | 1601 |
| Er'yave | city | Laanemaa | Estonia | 58.9558333 | 23.6269444 | 32 | 919 |
| Erala | city | Tartumaa | Estonia | 58.4638889 | 26.6825 | 141 | 4034 |
| Erastvere | city | Polvamaa | Estonia | 57.9697222 | 26.7938889 | 416 | 1333 |
| Ereda | city | Ida-Virumaa | Estonia | 59.3155556 | 27.2361111 | 213 | 4684 |
| Ereda Asundus | city | Ida-Virumaa | Estonia | 59.3155556 | 27.2361111 | 213 | 4684 |
| Erenurt | city | Laanemaa | Estonia | 58.7166667 | 23.7666667 | 22 | 984 |
| Erepere | city | Laanemaa | Estonia | 58.5652778 | 23.6486111 | 32 | 927 |
| Ereste | city | Viljandimaa | Estonia | 58.1977778 | 25.4986111 | 226 | 1615 |
| Eriku | city | Saaremaa | Estonia | 58.5777778 | 22.93 | 29 | 1026 |
| Erisma | city | Raplamaa | Estonia | 59.0322222 | 25.0513889 | 308 | 1050 |
| Erja | city | Laanemaa | Estonia | 58.9025 | 23.6638889 | 22 | 1066 |
| Erjave | city | Laanemaa | Estonia | 58.9558333 | 23.6269444 | 32 | 919 |
| Erma | city | Parnumaa | Estonia | 58.6308333 | 24.5238889 | 75 | 1514 |
| Ermistu | city | Parnumaa | Estonia | 58.3652778 | 24.0133333 | 85 | 1386 |
| Erra | city | Ida-Virumaa | Estonia | 59.3719444 | 26.99 | 147 | 4680 |
| Erra-Matka | city | Ida-Virumaa | Estonia | 59.3883333 | 27.027778 | 150 | 4026 |
| Ersava | city | Polvamaa | Estonia | 57.945 | 27.6338889 | 134 | 1292 |
| Ertsma | city | Parnumaa | Estonia | 58.6147222 | 24.4625 | 62 | 1523 |
| Eru | city | Laane-Virumaa | Estonia | 59.5627778 | 25.8461111 | 16 | 2011 |
| Eru | city | Valgamaa | Estonia | 57.9258333 | 26.1788889 | 177 | 1576 |
| Eru Kula | city | Laane-Virumaa | Estonia | 59.5627778 | 25.8461111 | 16 | 2011 |
| Eru Küla | city | Laane-Virumaa | Estonia | 59.5627778 | 25.8461111 | 16 | 2011 |
| Ervita | city | Jarvamaa | Estonia | 58.9316667 | 26.0763889 | 265 | 1308 |
| Ervu | city | Tartumaa | Estonia | 58.2080556 | 26.22 | 295 | 4096 |
| Erʼyave | city | Laanemaa | Estonia | 58.9558333 | 23.6269444 | 32 | 919 |
| Es-Somra | city | Parnumaa | Estonia | 58.3666667 | 24.1666667 | 91 | 1531 |
| Es-Vybu | city | Jarvamaa | Estonia | 59.0333333 | 25.4666667 | 252 | 1436 |
| Esikula | city | Hiiumaa | Estonia | 58.8055556 | 22.8375 | 32 | 547 |
| Esiküla | city | Hiiumaa | Estonia | 58.8055556 | 22.8375 | 32 | 547 |
| Esivere | city | Laanemaa | Estonia | 58.6363889 | 23.5688889 | 45 | 920 |
| Esku | city | Jogevamaa | Estonia | 58.6475 | 25.8830556 | 219 | 1295 |
| Esmyae | city | Harjumaa | Estonia | 59.2380556 | 24.5086111 | 150 | 9725 |
| Esna | city | Jarvamaa | Estonia | 58.9669444 | 25.7836111 | 262 | 1303 |
| Espre | city | Laanemaa | Estonia | 58.9130556 | 23.6188889 | 22 | 1052 |
| Essu | city | Laane-Virumaa | Estonia | 59.4325 | 26.365 | 219 | 1653 |
| Essu Asundus | city | Laane-Virumaa | Estonia | 59.4325 | 26.365 | 219 | 1653 |
| Esterbyu | city | Laanemaa | Estonia | 58.9913889 | 23.5225 | 32 | 738 |
| Estnurga | city | Viljandimaa | Estonia | 58.5194444 | 25.9430556 | 187 | 1581 |
| Etsaste | city | Tartumaa | Estonia | 58.1888889 | 26.4858333 | 341 | 3618 |
| Eyama | city | Jarvamaa | Estonia | 58.78 | 25.5727778 | 229 | 1313 |
| Eydapere | city | Raplamaa | Estonia | 58.7513889 | 24.9427778 | 196 | 1085 |
| Eynbyu | city | Laanemaa | Estonia | 58.9911111 | 23.4558333 | 0 | 341 |
| Eypri | city | Laane-Virumaa | Estonia | 59.1308333 | 26.3344444 | 410 | 1667 |
| Ezikyula | city | Hiiumaa | Estonia | 58.8055556 | 22.8375 | 32 | 547 |
| Ezivere | city | Laanemaa | Estonia | 58.6363889 | 23.5688889 | 45 | 920 |
| Ezuu | city | Harjumaa | Estonia | 59.4677778 | 25.1644444 | 111 | 6836 |
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