| Name | What | Region | Country | Lat | Long | Elev Ft. | Pop Est |
| Šafčān | city | Velayat-e Badakhshan | Afghanistan | 36.9475 | 71.0355556 | 5357 | 2013 |
| Šaghān | city | Velayat-e Badakhshan | Afghanistan | 36.9277778 | 71.0486111 | 5652 | 2013 |
| Šah Jagūn | city | Velayat-e Badakhshan | Afghanistan | 38.3977778 | 71.0672222 | 5843 | 1601 |
| Šatak | city | Velayat-e Badakhshan | Afghanistan | 37.1008333 | 70.3361111 | 5498 | 2007 |
| Šaykhak | city | Velayat-e Badakhshan | Afghanistan | 36.5197222 | 70.2572222 | 5534 | 2021 |
| Šeblān Jēl | city | Velayat-e Badakhshan | Afghanistan | 37.3919444 | 70.685 | 8891 | 2002 |
| Šekastagān | city | Velayat-e Badakhshan | Afghanistan | 36.74 | 70.1597222 | 3585 | 2038 |
| Šekh-i-Kalān | city | Velayat-e Badakhshan | Afghanistan | 36.8569444 | 70.5013889 | 6683 | 2016 |
| Šipūn | city | Velayat-e Badakhshan | Afghanistan | 38.0691667 | 70.5041667 | 8228 | 1950 |
| Škūl Darrah | city | Velayat-e Badakhshan | Afghanistan | 37.4452778 | 70.6727778 | 7959 | 2002 |
| Šāel | city | Velayat-e Badakhshan | Afghanistan | 37.3563889 | 70.4661111 | 8208 | 2002 |
| Šāfkeng | city | Velayat-e Badakhshan | Afghanistan | 37.4894444 | 70.5433333 | 7883 | 1999 |
| Šāh Khwāja | city | Velayat-e Badakhshan | Afghanistan | 36.7394444 | 70.2738889 | 7591 | 2017 |
| Šājak | city | Velayat-e Badakhshan | Afghanistan | 38.3022222 | 70.9780556 | 9852 | 1974 |
| Šālīl | city | Velayat-e Badakhshan | Afghanistan | 37.7491667 | 70.4677778 | 9586 | 1992 |
| Šāzamīn | city | Velayat-e Badakhshan | Afghanistan | 37.2191667 | 70.6061111 | 6617 | 2003 |
| Šēb Darrah 1 | city | Velayat-e Badakhshan | Afghanistan | 37.0516667 | 70.6477778 | 5360 | 2007 |
| Šēb Darrah 2 | city | Velayat-e Badakhshan | Afghanistan | 37.0375 | 70.6494444 | 6210 | 2007 |
| Šēkh-i-Mast | city | Velayat-e Badakhshan | Afghanistan | 37.3819444 | 70.7127778 | 8881 | 2002 |
| Šēkhān | city | Velayat-e Badakhshan | Afghanistan | 37.2977778 | 70.0922222 | 5593 | 2594 |
| Šīkač | city | Velayat-e Badakhshan | Afghanistan | 36.6975 | 71.5988889 | 9097 | 1769 |
| Šīn Ghūk | city | Velayat-e Badakhshan | Afghanistan | 36.5569444 | 71.3869444 | 9055 | 2021 |
| Šīna | city | Velayat-e Badakhshan | Afghanistan | 37.1536111 | 70.6602778 | 6243 | 2007 |
| Šīnī | city | Velayat-e Badakhshan | Afghanistan | 37.5641667 | 70.4252778 | 5410 | 1993 |
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